BIMD 202 02: Introduction to Medical Microbiology Lecture

BIMD 202 - Introduction to Medical Microbiology Lecture

2023 Fall Syllabus, Section 02, CRN 2791

Course Information

You are responsible for knowing this material, so please read carefully. Any changes will be announced in a Blackboard Announcement. You will be responsible for any changes. Your continued enrollment in this course is your implicit agreement to abide by the requirements of this class.

Times and Location

MWF 11:15am-12:05pm in Columbia Hall 1360

Instructor Information

Monica Norby

Dr.

Email: monica.norby@und.edu

Office: SMHS W128

2023 Fall Office Hours:
Office Hours: By appointment – Please use Starfish Appointment Scheduler
Zoom Personal Meeting Room: 2673599431

Office Phone: 701-777-4970


About the Professor

Course Description

An introductory medical microbiology course that provides a background in all aspects of microbial agents and disease including cell biology, impact on human health, and public health approaches to microbial disease. Three hours of lecture per week.

Related Sections

  • BIMD 202L 01 - Introduction to Medical Microbiology Laboratory: TR 11am-12:50pm, Monica Norby
  • BIMD 202L 02 - Introduction to Medical Microbiology Laboratory: Does Not Meet, Monica Norby
  • BIMD 202L 03 - Introduction to Medical Microbiology Laboratory: TR 11am-12:50pm, Monica Norby
  • BIMD 202L 04 - Introduction to Medical Microbiology Laboratory: TR 2pm-3:50pm, Monica Norby
  • BIMD 202L 05 - Introduction to Medical Microbiology Laboratory: TR 2pm-3:50pm, Monica Norby
  • BIMD 202L 06 - Introduction to Medical Microbiology Laboratory: TR 2pm-3:50pm, Monica Norby
  • BIMD 202L 07 - Introduction to Medical Microbiology Laboratory: TR 11am-12:50pm, Monica Norby

Prerequisites:  A grade of C or higher in CHEM 116 or CHEM 121.

Credit Hours: 3 credit hours per week

Learning Outcomes

After completing BIMD 202, it is expected that students will achieve the following goals by meeting the associated objectives:

  • Goal 1: Develop an understanding of the Impact of Microorganisms in Health and Disease
  • Goal 2: Develop an understanding of Microbial Pathogenicity
  • Goal 3: Develop an understanding of Identifying and Managing Infectious Disease
  • Goal 4: Develop an understanding of Healthcare Associated Infections and Epidemiology
  • Goal 5: Develop an understanding of Controlling Microbial Growth to Limit Disease

Course Materials

Required Text:  Talaro's Foundations in Microbiology 12th edition (McGraw Hill) (eBook) with Connect Access. Hardcopy (optional)

Required Access:

  • Connect Access (is purchased along with digital copy of the textbook)
  • Top Hat (https://www.tophat.com). We will utilize both the Classroom and Test features.

Top Hat is an interactive, classroom response system that you will be using in lecture sessions to submit answers to in-class questions using your Apple or Android smartphones, tablets, or laptops. Using Top Hat in lecture will help you self-assess, identify areas in which you may need further study, and practice answering questions that are very similar in structure and content to questions you will see on quizzes and exams.

Top Hat requires a paid subscription ($30 for the classroom feature for 1 semester (4 months)). A full breakdown of all subscription options available can be found at Top Hat's Pricing Page.

You must register with your @und.edu email address. You can register for our Top Hat course by visiting the course website: https://app.tophat.com/e/. If you already have a Top Hat account, you can join our course by entering the Join Code. Our course Join Code .

You can visit the Quick Start Guide which outlines how you will register for a Top Hat account, as well as providing a brief overview to get you up and running on the system. Should you require assistance with Top Hat at any time, since they require specific user information to troubleshoot these issues, please contact their Support Team directly by way of email, the in-app support button, or by calling 1-888-663-5491.

Course Logistics

Online Lectures

This is a flipped course. This means that lectures will be outside of class and “homework” will be done in class as interactive discussions and classroom activities. I will post video lectures in Top Hat. It is expected that you will watch each of the lectures assigned before coming to class.

Expectations/Protocols

As a student of BIMD 202, I expect that you

  • fully review the course syllabus and go to it if you have questions before asking me;
  • come to class prepared each day…this includes any preparatory reading and video lectures;
  • effectively interact with other students during in-class discussions and activities;
  • and exercise academic honesty while completing all quizzes, in-class work, and exams.

As the instructor of BIMD 202, you should expect of me that I

  • clearly inform you of what you should do to prepare for each class;
  • create a class environment that is worth coming to each day;
  • provide a safe environment for discussions and activities in which each individual feels comfortable sharing their thoughts and perspectives;
  • and fairly grade assignments and exams, providing useful feedback in a timely manner.

Communication

If you need to contact me, email is the best and easiest way. Please use your UND email account. Be sure to indicate which class you are in (BIMD 202 On-campus Lecture) the Subject line.

Communication is vitally important, especially if you end up in a situation where you are unable to take an exam as scheduled. Excused absences are given when a student provides a letter from UND coach/advisor/military officer or an email or call from the Office of Student Rights and Responsibilities (OSRR). Excuses must be provided before the exam date. Excused absence exam make-ups are on a case-by-case basis and will need to be discussed with me.

Assessments

Reading Assignments

Weekly Reading Assignments (4 points each)120

Each week we will have a reading assignment on Connect. The reading assignment will be due before class of each topic starting. Follow along with the schedule in the syllabus so you do not miss a reading assignment. No reading assignments submitted past the due date will be accepted and missed assignments will result in a zero.

Quiz

Weekly Quizzes (10 points each)140

Each week we will have a reading assignment on Connect. The reading assignment will be due before class of each topic starting. Follow along with the schedule in the syllabus so you do not miss a reading assignment. Reading assignments submitted passed the due date will have a 50% score deduction.

Participation

In Class Activities (10 points each)100

This is a flipped course. This means that lectures will be outside of class and in class we will engage in interactive discussions and classroom activities. These activities are aimed at getting you to interact with the content and come to understand the concepts we cover. We will use Top Hat extensively to facilitate interactive discussions. Top Hat activity will count toward your participation points (see Method of Evaluation section), so please be prepared each day with a device (e.g., computer, tablet, phone). Various other in-class activities will have stand-alone points. These will be randomly spaced throughout the semester and only available for those in attendance. Points are only available for people completing the activities in class, no make-up for missed

Presentation

Disease Presentation 50

You will work in groups of 2 or 3 to present on a microbial disease of either the skin and eyes, nervous system, cardiovascular/lymphatic system, respiratory system, gastrointestinal tract, or genitourinary system. Your book chapters 18 through 25 will be good resources to get you started on your presentation. Presentations will occur throughout the semester and a schedule/sign-up for these presentations will be provided in class.

Exam

Unit Exams 500

There will be a total of 4 units in this course with an exam at the end of each unit. See the chapter breakdown and dates listed below in the Course Schedule. All exams will be administered in person, during the scheduled class time, through Top Hat. All exams will be proctored. All exam absences must be arranged prior to the exam, directly with the instructor. Any exam absences not communicated prior to the exam will result in a zero.  

Final Exam 200

The final exam will be comprehensive, covering material from throughout the semester. All exams will be administered in person, during the scheduled class time, through Top Hat. There will be no make-up for missed final exams.

Assessment Summary

Assignment Points
Weekly Reading Assignments  120
Weekly Quizzes

 140

In-Class Activities

 100

Disease Presentation

   50

Unit Exams

 500

Final Exam

 200

Total

1000

Final Grade Scale

90-100% A

80-89% B

70-79% C

60-69% D

< 59% F

Total points will be carried out to the tenths place value and rounded up to the nearest whole number for the final grade (≥5 is rounded up). For example, if your final grade is 79.4%, that would round to a 79% and you would have a C. If your final grade is 79.6%, that would round to an 80% and you will have a B. No exceptions will be made to this rounding.

Any suspected errors in grading must be called to my attention via e-mail.

Schedule of Topics and Assignments

Day: Date: Reading(s): Agenda/Topic: Due:
Wed 8/23 Chapter 1 Syllabus Review Introduction to Microbes
Fri 8/25 Chapter 2 Methods for Culturing & Microscopic Analysis of Microorganisms Chapter 1 & 2 Reading Assignment Due
Mon 8/28 Chapter 3 Bacteria Week 1 Quiz Due
Wed 8/30 Chapter 3 Bacteria Chapter 3 Reading Assignment Due
Fri 9/1 Chapter 4 Bacteria
Mon 9/4 No Class
Wed 9/6 Chapter 4 Eukaryotic Microorganisms Week 2 Quiz Due

Chapter 4 Reading Assignment Due
Fri 9/8 Chapter 5 Viruses (& Prions)
Mon 9/11 Chapter 5 Viruses (& Prions) Week 3 Quiz Due
Chapter 5 Reading Assignment Due
Wed 9/13 Unit 1 Exam
Chapters 1-5
Fri 9/15 Chapter 11 Interaction Between Microbes & Humans
Mon 9/18 Chapter 11 Interaction Between Microbes & Humans Week 4 Quiz Due
Chapter 11 Reading Assignment Due
Wed 9/20 Chapter 11 Interaction Between Microbes & Humans
Fri 9/22 Chapter 8 Microbial Genetics & Genetic Engineering
Mon 9/25 Chapter 8 Microbial Genetics & Genetic Engineering Week 5 Quiz Due
Chapter 8 Reading Assignment Due
Wed 9/27 Chapter 8 Microbial Genetics & Genetic Engineering
Fri 9/29 Unit 2 Exam
Chapters 11 & 8
Mon 10/2 Chapter 15 Diagnosing Infections Week 6 Quiz Due
Wed 10/4 Chapter 15 Diagnosing Infections
Fri 10/6 Chapter 15 Diagnosing Infections
Mon 10/9 Chapter 15 Diagnosing Infections Week 7 Quiz Due
Wed 10/11 Chapter 12 Host Defenses I
Fri 10/13 Chapter 13 Host Defenses II
Mon 10/16 Chapter 13 Host Defenses II Week 8 Quiz Due
Wed 10/18 Chapter 13 Immunization
Fri 10/20 Chapter 22 One Health
Mon 10/23 Chapter 22 One Health Week 9 Quiz Due
Wed 10/25 Unit 3 Exam
Chapters 15, 12, 13, 22
Fri 10/27 Chapter 6 Microbial Nutrition & Growth
Mon 10/30 Chapter 6 Microbial Nutrition & Growth Week 10 Quiz Due
Wed 11/1 Chapter 6 Microbial Nutrition & Growth
Fri 11/3 Chapter 7 Microbial Metabolism
Mon 11/6 Chapter 7 Microbial Metabolism Topic 11 Quiz Due
Wed 11/8 Chapter 7 Microbial Metabolism
Fri 11/10 No Class
Mon 11/13 Chapter 9 Physical & Chemical Control of Microbes Week 12 Quiz Due
Wed 11/15 Chapter 9 Physical & Chemical Control of Microbes
Fri 11/17 Chapter 9 Physical & Chemical Control of Microbes
Mon 11/20 Chapter 10 Megaplate Case Study Week 13 Quiz Due
Wed 11/22 No Class
Fri 11/24 No Class
Mon 11/27 Chapter 10 Antimicrobial Treatment (No Quiz for Week 14)
Wed 11/29 Chapter 10 Antimicrobial Treatment
Fri 12/1 Chapter 10 Antimicrobial Treatment
Mon 12/4 Chapter 10 Antimicrobial Treatment Week 15 Quiz Due
Wed 12/6 Unit 4 Exam
Chapters 6, 7, 9, 10
Fri 12/8 Reading & Review Day

Course Policies

University of North Dakota Policies & Resources

Academic Integrity

Academic integrity is a serious matter, and any deviations from appropriate behavior will be dealt with strongly. At the discretion of the professor, situations of concern may be dealt with as a scholastic matter or a disciplinary matter.

As a scholastic matter, the professor has the discretion to determine appropriate penalties for the student’s workload or grade, but the situation may be resolved without involving many individuals. An alternative is to treat the situation as a disciplinary matter, which can result in suspension from the University, or have lesser penalties. Be aware that I view this as a very serious matter and will have little tolerance and/or sympathy for questionable practices. A student who attempts to obtain credit for work that is not their own (whether that be on a paper, quiz, homework assignment, exam, etc.) will likely receive a failing grade for that item of work, and at the professor’s discretion, may also receive a failing grade in the course. For more information read the Code of Student Life.

Access and Opportunity, Disability Support, & Medical Services

The University of North Dakota is committed to providing equal access to students with documented disabilities. To ensure access to this class and your program, please contact Disability Services for Students (DSS) to engage in a confidential discussion about accommodations for the classroom and clinical settings. Accommodations are not provided retroactively. Students are encouraged to register with DSS at the start of their program. More information can be obtained by email UND.dss@UND.edu or by phone at 701.777.2664.

COVID-19

UND is committed to maintaining a safe learning environment while providing quality learning experiences for our students. COVID-19’s continued presence within our UND community may necessitate changes in classroom management as the academic year progresses. As such, UND asks students and instructors to be flexible when necessary to promote a safe environment for learning. Please do not attend an in-person class or lab if you are feeling ill, particularly if you are experiencing symptoms of COVID-19, or if you have been directed by health professionals to quarantine or isolate. If you are not able to attend class or lab, please notify your instructor as soon as possible and discuss options for making up any missed work in order to ensure your ability to succeed in the course. If you will have an extended absence due to serious illness or other uncontrollable circumstances, you may request an absence notification through the Office of Student Rights and Responsibilities. Similarly, if your instructor is ill they may need to cancel class or temporarily move your course to online delivery to ensure that you are able to complete the course successfully.  Instructors may require students to wear masks in the classroom or in the laboratory as a preventative measure designed to facilitate uninterrupted classroom engagement and to facilitate health and safety in the classroom.   If your instructor does require masks in class or in a laboratory, you are expected to comply with that request.

UND also strongly encourages all members of the University community, including students, to get vaccinated, seek out testing when needed, and model positive behavior both on- and off-campus to foster a healthy and safe learning environment for all students. Individuals who would like to discuss disability accommodations regarding masks should contact the Disability Services for Students (DSS) office at 701.777.2664 or UND.dss@UND.edu. Individuals who are unable to wear a mask due to a sincerely held religious belief should contact the UND Equal Opportunity and Title IX Office at 701.777.4171 or UND.EO.TitleIX@UND.edu.

Religious Accommodations

UND offers religious accommodations, which are reasonable changes in the academic environment that enable a student to practice or observe a sincerely held religious belief without undue hardship on the University. Examples include time for prayer or the ability to attend religious events or observe a religious holiday. To request an accommodation, complete the student religious accommodation request form. If you have any questions, you may contact the Equal Opportunity & Title IX Office.

Pregnancy Accommodations

Students who need assistance with academic adjustments related to pregnancy or childbirth may contact the Equal Opportunity & Title IX Office or Academic Affairs to learn about your options. Additional information and services may be found at Pregnancy Resources.

Notice of Nondiscrimination

It is the policy of the University of North Dakota that no person shall be discriminated against because of race, religion, age, color, gender, disability, national origin, creed, sexual orientation, gender identity, genetic information, marital status, veteran’s status, or political belief or affiliation and the equal opportunity and access to facilities shall be available to all. Concerns regarding Title IX, Title VI, Title VII, ADA, and Section 504 may be addressed to Donna Smith, Assistant Vice President for Equal Opportunity & Title IX and Title IX/ADA Coordinator, 102 Twamley Hall, 701.777.4171, UND.EO.TitleIX@UND.edu or the Office for Civil Rights, U.S. Dept. of Education, 230 S. Dearborn St., 37th Floor, Chicago, IL 60604 or any other federal agency.

Reporting of Discrimination, Harassment, or Sexual Misconduct

If you or a friend has experienced sexual misconduct, such as sexual harassment, sexual assault, domestic violence, dating violence, or stalking, please contact the Equal Opportunity & Title IX Office or UND’s Title IX Coordinator, Donna Smith, for assistance: 701.777.4171; donna.smith@UND.edu; or visit the Title IX webpage. You may also contact the Equal Opportunity & Title IX office if you or a friend has experienced discrimination or harassment based on a protected class, such as race, color, national origin, religion, sex, age, disability, sexual orientation, gender identity, genetic information, pregnancy, marital or parental status, veteran's status, or political belief or affiliation.

Faculty Reporting Obligations Regarding Discrimination, Harassment, or Sexual Misconduct

It is important for students to understand that faculty are required to share with UND’s Title IX Coordinator any incidents of sexual misconduct or of discrimination or harassment based on a protected class that they become aware of, even if those incidents occurred in the past or are disclosed as part of a class assignment. This does not mean an investigation will occur if the student does not want that, but it does allow UND to provide resources to help the student continue to be successful at UND. If you have been impacted by discrimination, harassment, or sexual misconduct, you can find information about confidential support services on the Equal Opportunity & Title IX webpage..

UND Cares Program

How to Seek Help When in Distress

We know that while college is a wonderful time for most students, however, some students may struggle or have issues that arise. You may experience students in distress on campus, in your classroom, in your home, and within residence halls. Distressed students may initially seek assistance from faculty, staff members, their parents, and other students. In addition to the support we can provide to each other, there are also professional support services available to students through the Dean of Students and University Counseling Center. Both staffs are available to consult with you about getting help or providing a friend with the help that he or she may need. For more additional information, please visit the UND Cares Program Webpage.

How to Recognize When a Student is in Distress

The term “distressed” can mean any of the following:

  • Student has significant changes in eating, sleeping, grooming, spending, or other daily activities.
  • Student has cut off or minimized contact with family or friends.
  • Student has significant changes in performance or involvement in academics, sports, extracurricular, or social activities.
  • Student describes problems (missing class, not remembering, destructive behavior) that result from experiences with drinking or drugs.
  • Student is acting withdrawn, volatile, tearful, etc.
  • Student is acting out of character or different than usual.
  • Student is talking explicitly about hopelessness or suicide.
  • Student has difficulty concentrating or difficulty carrying on a normal conversation.
  • Student has excessive dependence on others for company or support.
  • Student reports feeling out of control of one’s emotions, thoughts, or behaviors.

Land Acknowledgement Statement

Today, the University of North Dakota rests on the ancestral lands of the Pembina and Red Lake Bands of Ojibwe and the Dakota Oyate - presently existing as composite parts of the Red Lake, Turtle Mountain, White Earth Bands, and the Dakota Tribes of Minnesota and North Dakota. We acknowledge the people who resided here for generations and recognize that the spirit of the Ojibwe and Oyate people permeate this land. As a university community, we will continue to build upon our relations with the First Nations of the State of North Dakota - the Mandan, Hidatsa, and Arikara Nation, Sisseton-Wahpeton Oyate Nation, Spirit Lake Nation, Standing Rock Sioux Tribe, and Turtle Mountain Band of Chippewa Indians.

Additional Resources

It is my goal to foster an environment of mutual respect in which everyone feels comfortable voicing their opinions, sharing their stories, and learning about potentially heavy or personally relevant material. If, at any point, you feel like the information covered in this class elicits thoughts, feelings, or concerns that you would like to discuss further, don’t hesitate to reach out to me, or the UND Counseling Center (701-777-2127).

Further, if you experience extenuating circumstances, sexual violence, identity-based harm, or any other personal crisis during the semester, don’t hesitate to reach out to me so we can provide academic assistance and help you in this course, and put you in contact with the appropriate resources and services (if needed).